Release 56
(Apr 24, 2025)

QTL 157290 Description:

 Trait Information
Trait name: Calving to conception interval Vertebrate Trait Ontology: Female fertility trait
Reported name: (n/a) Product Trait Ontology: n/a
Symbol: DAYOPEN Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:10
QTL Peak Location:75.01 (cM)
QTL Span:75.01-75.01 (cM)
67.5-67.5 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs109702177
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:Mendelian
Test base:Experiment-wise
Threshold significance level:Significant
P_values<0.05
Dominance effect:n/a
Additive effect:n/a
Associated Gene:SOCS4 (suppressor of cytokine signaling 4)
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Holstein cattle in a hot and humid climate in Mexico.
     Breeds associated:
    Design:Animals were genotyped using a panel of 179 tag SNPs within the PRL and GH/IGF-1 pathways and analyzed for for fertility traits.
    Analysis:Association analyses were conducted using a mixed-effects model for continuous traits.
    Software:Haploview, SAS
    Notes: 
    Links:Edit

     Reference
    Authors:Leyva-Corona JC, Reyna-Granados JR, Zamorano-Algandar R, Sanchez-Castro MA, Thomas MG, Enns RM, Speidel SE, Medrano JF, Rincon G, Luna-Nevarez P
    Affiliation: Departamento de Ciencias Agronómicas y Veterinarias, Instituto Tecnológico de Sonora, Calle 5 de Febrero 818 Sur, Colonia Centro, 85000, Cd. Obregón, Sonora, México
    Title:Polymorphisms within the prolactin and growth hormone/insulin-like growth factor-1 functional pathways associated with fertility traits in Holstein cows raised in a hot-humid climate
    Journal:Tropical animal health and production, 2018, 50(8):1913-1920
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #29926362
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  • Cite this Data:

    Animal QTLdb: QTL157290 was published in 2018, and was curated into QTLdb on 2018-07-06. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:157290

     

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