| QTL Map Information |
|---|
| Chromosome: | 25 |
| QTL Peak Location: | 35.66 (cM) |
| QTL Span: | 35.66-35.66 (cM)
22.7-22.7 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs109296681 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Suggestive |
 |
P_values | 9.393e-05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Cattle
Animal breed (IDs) involved: 106 |
| Breeds associated:
n/a
|
| Design: | nimals were genotyped using the Illumina BovineSNP50 BeadChip and analyzed for milk production traits. Atotal of 37,031 SNPs spanning across 29 autosomes were used for analyses. |
| Analysis: | Genome-wide association |
| Software: | Plink, Haploview ,SNPchiMp,PANTHER |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | M. M. I. Salem, G. Thompson, S. Chen, A. Beja-Pereira and J. Carvalheira |
| Affiliation: | Department of Animal and Fish Production, Faculty of Agriculture, University of Alexandria, Egypt |
| Title: | Genomic region, biological processes and pathways associated with Somatic Cell Counts in Dairy Cattle |
| Journal: | Animal genetics, 2018, |
| Links: |
No PubMed entry | Abstract | List all data
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