| QTL Map Information |
|---|
| Chromosome: | 23 |
| QTL Peak Location: | 33.81 (cM) |
| QTL Span: | 33.81-33.81 (cM)
23.3-23.3 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs41566363 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Holstein and Holstein x Jersey cattle. |
| Breeds associated:
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| Design: | Animals were genotyped using the BovineSNP50 v2 BeadChip and analyzed for BLV proviral load and white blood cell count. A total of 44,174 SNPs were used for analysis. |
| Analysis: | Linear mixed models were used. |
| Software: | PLINK, DualPHASEv1.1, GCTA |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Carignano HA, Roldan DL, Beribe MJ, Raschia MA, Amadio A, Nani JP, Gutierrez G, Alvarez I, Trono K, Poli MA, Miretti MM |
| Affiliation: | Instituto Nacional de Tecnología Agropecuaria (INTA). Centro de Investigaciones en Ciencias Veterinarias y Agronómicas (CICVyA). Instituto de Genética, B1686, Hurlingham, Argentina |
| Title: | Genome-wide scan for commons SNPs affecting bovine leukemia virus infection level in dairy cattle |
| Journal: | BMC genomics, 2018, 19(1): 142 |
| Links: |
PubMed | Abstract | List all data
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