| QTL Map Information |
|---|
| Chromosome: | 3 |
| QTL Peak Location: | 23.42 (cM) |
| QTL Span: | 23.42-23.42 (cM)
23.6-23.6 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs137365296 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Chromosome-wise |
| Threshold significance level: | Suggestive |
 |
P_values | <0.10 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | HMGCS2 (3-hydroxy-3-methylglutaryl-CoA synthase 2) |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #153734
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were Holstein cows. |
| Breeds associated:
|
| Design: | Animals were genotyped using a custom panel of candidate gene SNPs and analyzed for ketosis incidence. A total of 336 SNPs were used for analysis. |
| Analysis: | A univariate single-SNP mixed model was used. |
| Software: | SNP1101 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Kroezen V, Schenkel F S, Miglior F, Baes C F, Squires E J |
| Affiliation: | Centre for Genetic Improvement of Livestock, Department of Animal Biosciences, University of Guelph, ON, Canada, N1G 2W1 |
| Title: | Candidate gene association analyses for ketosis resistance in Holsteins |
| Journal: | Journal of dairy science, 2018, 101(6):5240-5249 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | Second or later lactations |
User inputs on reference #29550117
Add your comments
Note similar findings
Note contradictions
|
