Release 56
(Apr 24, 2025)

QTL 153259 Description:

 Trait Information
Trait name: Shear force Vertebrate Trait Ontology: n/a
Reported name: (n/a) Product Trait Ontology: Meat tenderness
Symbol: SF Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:7
QTL Peak Location:115.85 (cM)
QTL Span:115.85-115.85 (cM)
96.2-96.2 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs210861835
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:Mendelian
Test base:Genome-wise
Threshold significance level:Significant
P_values<0.05
Dominance effect:n/a
Additive effect:n/a
Associated Gene:CAST (calpastatin)
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Angus-Brahman steers.
     Breeds associated:
    Design:Animals were genotyped for 16 SNPs in mu-calpain and 28 SNPs in calpastatin and analyzed for shear force.
    Analysis:The general linear model procedure was used.
    Software:SAS, Haploview
    Notes: 
    Links:Edit

     Reference
    Authors:Leal-Gutiérrez JD, Elzo MA, Johnson DD, Scheffler TL, Scheffler JM, Mateescu RG
    Affiliation:Department of Animal Sciences, University of Florida, Gainesville, FL, United States
    Title:Association of μ-Calpain and Calpastatin Polymorphisms with Meat Tenderness in a Brahman-Angus Population
    Journal:Frontiers in genetics, 2018, 9: 56
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #29520298
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  • Cite this Data:

    Animal QTLdb: QTL153259 was published in 2018, and was curated into QTLdb on 2018-03-20. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:153259

     

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