| QTL Map Information |
|---|
| Chromosome: | 29 |
| QTL Peak Location: | 14.11 (cM) |
| QTL Span: | 13.19-15.04 (cM)
9.2-10.5 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs42190111 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
P_values | 0.01551 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #15265
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were Angus, Hereford, Murray Grey, Shorthorn, Brahman, Belmont Red, Santa Gertrudis, Taurin-Brahman crossbred, and Tropical Composite-Brahman crossbred cattle. Associations were confirmed in a sample of Angus, Hereford, and Brahman. |
| Breeds associated:
|
| Design: | Approximately 54,000 SNP were genotyped in the initial analysis. Discovery and confirmation samples were genotyped for 329 common SNPs and analyzed for meat and carcass traits. |
| Analysis: | A mixed model was used. |
| Software: | ASReml |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Bolormaa S, Neto LR, Zhang YD, Bunch RJ, Harrison BE, Goddard ME, Barendse W |
| Affiliation: | Cooperative Research Centre for Beef Genetic Technologies, Armidale, New South Wales 2351, Australia |
| Title: | A genome-wide association study of meat and carcass traits in Australian cattle |
| Journal: | J Anim Sci, 2011, 89(8):2297-309 |
| Links: |
PubMed | Abstract | List all data
| Edit |
User inputs on reference #21421834
Add your comments
Note similar findings
Note contradictions
|
