Release 56
(Apr 24, 2025)

QTL 15254 Description:

 Trait Information
Trait name: Subcutaneous fat thickness Vertebrate Trait Ontology: Subcutaneous adipose thickness
Trait details: rump fat thickness at the sacro-iliac crest of third sacral vertebra Product Trait Ontology: n/a
Symbol: SUBFAT Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:14
QTL Peak Location:32.03 (cM)
QTL Span:32.03-32.03 (cM)
22.9-22.9 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs42646660
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:Mendelian
Test base:n/a
Threshold significance level:Significant
P_values0.02633
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #15254
  • Add your annotations
  • Add your comments
  • Report problems
  •  QTL Experiment in Brief
    Animals:Animals were Angus, Hereford, Murray Grey, Shorthorn, Brahman, Belmont Red, Santa Gertrudis, Taurin-Brahman crossbred, and Tropical Composite-Brahman crossbred cattle. Associations were confirmed in a sample of Angus, Hereford, and Brahman.
     Breeds associated:
    Design:Approximately 54,000 SNP were genotyped in the initial analysis. Discovery and confirmation samples were genotyped for 329 common SNPs and analyzed for meat and carcass traits.
    Analysis:A mixed model was used.
    Software:ASReml
    Notes: 
    Links:Edit

     Reference
    Authors:Bolormaa S, Neto LR, Zhang YD, Bunch RJ, Harrison BE, Goddard ME, Barendse W
    Affiliation:Cooperative Research Centre for Beef Genetic Technologies, Armidale, New South Wales 2351, Australia
    Title:A genome-wide association study of meat and carcass traits in Australian cattle
    Journal:J Anim Sci, 2011, 89(8):2297-309
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #21421834
  • Add your comments
  • Note similar findings
  • Note contradictions
  • Cite this Data:

    Animal QTLdb: QTL15254 was published in 2011, and was curated into QTLdb on 2012-01-18. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:15254

     

    © 2003-2025: USA · USDA · NRPSP8 · Program to Accelerate Animal Genomics Applications. Contact: Bioinformatics Team