Release 56
(Apr 24, 2025)

QTL 14034 Description:

 Trait Information
Trait name: Somatic cell score Vertebrate Trait Ontology: Milk somatic cell quantity
Reported name: Somatic cell score Product Trait Ontology: Milk somatic cell count
Symbol: SCS Clinical Measurement Ontology: Milk somatic cell score
 QTL Map Information
Chromosome:2
QTL Peak Location:94 (cM)
QTL Span:58.14-58.34 (cM)
61.5-61.7 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:
Analysis type:Association
Model tested:n/a
Test base:n/a
Threshold significance level:Suggestive
P_values<0.1
Dominance effect:n/a
Additive effect:n/a
Associated Gene:CXCR1 (chemokine (C-X-C motif) receptor 1)
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Holstein-Friesian bulls and Holstein-Friesian, Jersey, Norwegian Red, Montbeliarde, and Holstein-Friesian x Jersey cows.
     Breeds associated:
    n/a
    Design:Animals were genotyped for 16 polymorphisms in 7 immune-related genes and analyzed for milk production and somatic cell count.
    Analysis:Linear and weighted mixed models were used.
    Software:ASREML
    Notes: 
    Links:Edit

     Reference
    Authors:Beecher C, Daly M, Childs S, Berry DP, Magee DA, McCarthy TV, Giblin L
    Affiliation:Teagasc Food Research Centre, Moorepark, Fermoy, Co. Cork, Ireland
    Title:Polymorphisms in bovine immune genes and their associations with somatic cell count and milk production in dairy cattle
    Journal:BMC genetics, 2010, 11:99
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #21054834
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  • Cite this Data:

    Animal QTLdb: QTL14034 was published in 2010, and was curated into QTLdb on 2012-07-31. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:14034

     

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