Release 56
(Apr 24, 2025)

QTL 140311 Description:

 Trait Information
Trait name: Somatic cell score Vertebrate Trait Ontology: Milk somatic cell quantity
Reported name: (n/a) Product Trait Ontology: Milk somatic cell count
Symbol: SCS Clinical Measurement Ontology: Milk somatic cell score
 QTL Map Information
Chromosome:6
QTL Peak Location:100.01 (cM)
QTL Span:100.01-100.01 (cM)
88.8-88.8 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs110291328
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:Mendelian
Test base:n/a
Threshold significance level:Significant
P_values0.014
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Irish Holstein-Friesian cows.
     Breeds associated:
    Design:Animals were genotyped for a SNP in the promoter of IL8 and analyzed for somatic cell score.
    Analysis:A weighted mixed animal model was used.
    Software:ASReml
    Notes: 
    Links:Edit

     Reference
    Authors:Stojkovic Bojan, Mullen Michael P, Donofrio Gaetano, McLoughlin Rachel M, Meade Kieran G
    Affiliation:Animal & Bioscience Research Department, Animal and Grassland Research and Innovation Centre, Teagasc, Grange, Dunsany, Co. Meath, Ireland
    Title:Interleukin 8 haplotypes drive divergent responses in uterine endometrial cells and are associated with somatic cell score in Holstein-Friesian cattle
    Journal:Veterinary immunology and immunopathology, 2017, 184: 18-28
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #28166928
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  • Cite this Data:

    Animal QTLdb: QTL140311 was published in 2017, and was curated into QTLdb on 2017-11-08. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:140311

     

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