| QTL Map Information |
|---|
| Chromosome: | 6 |
| QTL Peak Location: | 2.15 (cM) |
| QTL Span: | 2.15-2.15 (cM)
2.0-2.0 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs43445726 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
VARIANCE | 4.87% | | P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | MARCH1 (membrane associated ring-CH-type finger 1) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Chinese Holstein bulls. |
| Breeds associated:
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| Design: | Animals were genotyped for 20 SNPs in the PDE3A, PDGFRB, and MARCH1 genes and analyzed for semen quality traits. |
| Analysis: | Mixed models were used |
| Software: | DMU, SAS, Haploview |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Liu S, Yin H, Li C, Qin C, Cai W, Cao M, Zhang S |
| Affiliation: | Department of Animal Genetics and Breeding, College of Animal Science and Technology, National Engineering Laboratory for Animal Breeding, China Agricultural University, Beijing, 100193, China |
| Title: | Genetic effects of PDGFRB and MARCH1 identified in GWAS revealing strong associations with semen production traits in Chinese Holstein bulls |
| Journal: | BMC genetics, 2017, 18(1): 63 |
| Links: |
PubMed | Abstract | List all data
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