| QTL Map Information |
|---|
| Chromosome: | 17 |
| QTL Peak Location: | 19.09 (cM) |
| QTL Span: | 19.09-19.09 (cM)
14.5-14.5 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs41838421 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Holstein cattle. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina BovineSNP50 BeadChip and analyzed for MAP susceptibility. A total of 46,350 SNPs were used for analysis. |
| Analysis: | A three-step GRAMMAR-GC approach was used for GWAS. Gene set enrichment analysis was then performed to identify pathways of interest. |
| Software: | GenABEL in R |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Del Corvo M, Luini M, Stella A, Pagnacco G, Ajmone-Marsan P, Williams JL, Minozzi G |
| Affiliation: | DIVET, University of Milan, Via Celoria 10, Milan, Italy |
| Title: | Identification of additional loci associated with antibody response to Mycobacterium avium ssp. Paratuberculosis in cattle by GSEA-SNP analysis |
| Journal: | Mammalian genome, 2017, 28(11-12):520-527 |
| Links: |
PubMed | Abstract | List all data
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