Release 56
(Apr 24, 2025)

QTL 138387 Description:

 Trait Information
Trait name: Somatic cell score Vertebrate Trait Ontology: Milk somatic cell quantity
Reported name: (n/a) Product Trait Ontology: Milk somatic cell count
Symbol: SCS Clinical Measurement Ontology: Milk somatic cell score
 QTL Map Information
Chromosome:7
QTL Peak Location:22.98 (cM)
QTL Span:22.98-22.98 (cM)
17.8-17.8 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs210225471
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:Mendelian
Test base:n/a
Threshold significance level:Significant
P_values0.0006
Dominance effect:n/a
Additive effect:n/a
Associated Gene:C3 (complement C3)
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Baladi-Friesian crossbred cattle.
     Breeds associated:
    Design:Animals were genotyped for three SNPs in the C3 gene and analyzed for somatic cell score.
    Analysis:The general linear model procedure was used.
    Software:SAS
    Notes: 
    Links:Edit

     Reference
    Authors:El-Halawany N, Abd-El-Monsif SA, Al-Tohamy Ahmed FM, Hegazy L, Abdel-Shafy H, Abdel-Latif MA, Ghazi YA, Neuhoff C, Salilew-Wondim D, Schellander K
    Affiliation:Department of Cell Biology, National Research Centre, 12622 Giza, Egypt
    Title:Complement component 3: characterization and association with mastitis resistance in Egyptian water buffalo and cattle
    Journal:Journal of genetics, 2017, 96(1): 65-73
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #28360391
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  • Cite this Data:

    Animal QTLdb: QTL138387 was published in 2017, and was curated into QTLdb on 2017-09-06. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:138387

     

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