| QTL Map Information |
|---|
| Chromosome: | 12 |
| QTL Peak Location: | 100.93 (cM) |
| QTL Span: | 100.87-101.00 (cM)
72.9-73.0 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs42705033 |
| Peak: | |
| Lower, "Significant": | rs133235260 |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | QTL |
| Model tested: | Mendelian |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
VARIANCE | 0.10412 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Chinese Simmental cattle. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina BovineHD BeadChip and analyzed for fatty acid composition. A total of 595,715 SNPs were used for analysis. |
| Analysis: | GWAS analyses were conducted using BayesB and GRAMMAR-GC. |
| Software: | PLINK, ASReml, GenABEL in R, FREGAT in R |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Zhu B, Niu H, Zhang W, Wang Z, Liang Y, Guan L, Guo P, Chen Y, Zhang L, Guo Y, Ni H, Gao X, Gao H, Xu L, Li J |
| Affiliation: | Haidian District, Institute of Animal Science, Yuanmingyuan West Road 2#, Beijing, 100193, China |
| Title: | Genome wide association study and genomic prediction for fatty acid composition in Chinese Simmental beef cattle using high density SNP array |
| Journal: | BMC genomics, 2017, 18(1): 464 |
| Links: |
PubMed | Abstract | List all data
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