Release 56
(Apr 24, 2025)

QTL 135773 Description:

 Trait Information
Trait name: Calving to conception interval Vertebrate Trait Ontology: Female fertility trait
Reported name: (n/a) Product Trait Ontology: n/a
Symbol: DAYOPEN Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:16
QTL Peak Location:48.45 (cM)
QTL Span:48.45-48.45 (cM)
37.4-37.4 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs41803917
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:Mendelian
Test base:n/a
Threshold significance level:Significant
P_values0.01
Dominance effect:n/a
Additive effect:n/a
Associated Gene:SELL (selectin L)
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #135773
  • Add your annotations
  • Add your comments
  • Report problems
  •  QTL Experiment in Brief
    Animals:Animals were Holstein Friesian cows.
     Breeds associated:
    Design:Animals were genotyped for eight SNPs in the three selectin genes (SELP, SELL, SELE) and analyzed for fertility and milk production traits.
    Analysis:Mixed models were used.
    Software:ASReml, Haploview
    Notes: 
    Links:Edit

     Reference
    Authors:Chen X, Zhang S, Cheng Z, Cooke JS, Werling D, Wathes DC, Pollott GE
    Affiliation:Royal Veterinary College, North Mymms, Hatfield, Hertfordshire, United Kingdom
    Title:Polymorphisms in the selectin gene cluster are associated with fertility and survival time in a population of Holstein Friesian cows
    Journal:PloS one, 2017, 12(4): e0175555
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  

     Additional Information
    Comments:Second lactation
    User inputs on reference #28419109
  • Add your comments
  • Note similar findings
  • Note contradictions
  • Cite this Data:

    Animal QTLdb: QTL135773 was published in 2017, and was curated into QTLdb on 2017-07-12. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:135773

     

    © 2003-2025: USA · USDA · NRPSP8 · Program to Accelerate Animal Genomics Applications. Contact: Bioinformatics Team