| QTL Map Information |
|---|
| Chromosome: | 27 |
| QTL Peak Location: | 73.48 (cM) |
| QTL Span: | 73.48-73.48 (cM)
42.7-42.7 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs109051735 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
VARIANCE | 1.23% | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were 1/2 Red Angus, 1/4 Charolais, and 1/4 Tarentaise composite cattle. |
| Breeds associated:
|
| Design: | Animals were genotyped using the bovine 3K panel or Illumina BovineSNP50 BeadChip and analyzed for longevity. Low-density data were imputed to 50K and a total of 39,7.2 SNPs were used for analysis. |
| Analysis: | EMMAX was used for single-marker GWAS, and Bayesian analysis was performed using a BayesA model. |
| Software: | FImpute, GenSEL, R software, BLUPF90, GIBBSF90 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Hamidi Hay E, Roberts A |
| Affiliation: | USDA Agricultural Research Service, Fort Keogh Livestock and Range Research Laboratory, Miles City, MT 59301 |
| Title: | Genomic prediction and genome-wide association analysis of female longevity in a composite beef cattle breed |
| Journal: | Journal of animal science, 2017, 95(4): 1467-1471 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | 20-SNP window; endpoints not reported |
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