Release 56
(Apr 24, 2025)

QTL 135463 Description:

 Trait Information
Trait name: Somatic cell score Vertebrate Trait Ontology: Milk somatic cell quantity
Reported name: (n/a) Product Trait Ontology: Milk somatic cell count
Symbol: SCS Clinical Measurement Ontology: Milk somatic cell score
 QTL Map Information
Chromosome:1
QTL Peak Location:137.48 (cM)
QTL Span:137.48-137.48 (cM)
141.6-141.6 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":rs210846628
Peak:
Lower, "Significant":rs110299582
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:QTL
Model tested:Mendelian
Test base:n/a
Threshold significance level:Significant
P_values0.045
Dominance effect:n/a
Additive effect:n/a
Associated Gene:MX2 (MX dynamin like GTPase 2)
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Chinese Holstein cows.
     Breeds associated:
    Design:Animals were genotyped for two SNPs in the MX2 gene and analyzed for somatic cell score.
    Analysis:Linear models were used.
    Software:SPSS, SHEsis
    Notes: 
    Links:Edit

     Reference
    Authors:Chen N, Wang FQ, Yu N, Gao Y, Huang J, Dang R, Huang Y, Lan X, Lei C, Chen H
    Affiliation:a College of Animal Science and Technology , Northwest A&F University , Yangling , Shaanxi , China
    Title:Polymorphisms in MX2 Gene Are Related with SCS in Chinese Dairy Cows
    Journal:Animal biotechnology, 2017, : 1-9
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #28471716
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  • Cite this Data:

    Animal QTLdb: QTL135463 was published in 2017, and was curated into QTLdb on 2017-06-16. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:135463

     

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