| QTL Map Information |
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| Chromosome: | 10 |
| QTL Peak Location: | 7.20 (cM) |
| QTL Span: | 7.20-7.20 (cM)
6.5-6.5 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs110012582 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | ANKRD31 (ankyrin repeat domain 31) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
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| QTL Experiment in Brief |
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| Animals: | Animals were Mexican Holstein-Friesian cattle. |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina BovineLD v2.0 BeadChip, with data imputed to 50K, and analyzed for body size and conformation traits. A total of 46,523 SNPs were used for analysis. |
| Analysis: | Association analysis was performed via least-squares regression and generalized linear models. |
| Software: | PLINK, R software |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | González ME, González VM, Montaño MF, Medina GE, Mahadevan P, Villa C, Villa R |
| Affiliation: | Laboratory of Bioinformatics and Biofotonics, Engineering Institute, Autonomous University of Baja California, Mexicali, Baja California, Mexico |
| Title: | Genome-wide association analysis of body conformation traits in Mexican Holstein cattle using a mix of sampled and imputed SNP genotypes |
| Journal: | Genetics and molecular research : GMR, 2017, 16(2) |
| Links: |
PubMed | Abstract | List all data
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