| QTL Map Information |
|---|
| Chromosome: | 14 |
| QTL Peak Location: | 2.00 (cM) |
| QTL Span: | 2.00-2.00 (cM)
0.3-0.3 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs109752439 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
P_values | 0.012311 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Italian Holstein cows in their first, second, or third parity. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina BovineSNP50 BeadChip and analyzed for heat stress tolerance based on milk production traits. A total of 45,546 SNPs were used for analysis. |
| Analysis: | A genome-wide scan was performed on PCA scores using the GRAMMAR procedure. |
| Software: | GenABEL in R, SAS, AIREML90 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Macciotta N P P, Biffani S, Bernabucci U, Lacetera N, Vitali A, Ajmone-Marsan P, Nardone A |
| Affiliation: | Dipartimento di Scienze Agrarie e Forestali, Universita degli Studi della Tuscia-Viterbo, 01100 Viterbo, Italy |
| Title: | Derivation and genome-wide association study of a principal component-based measure of heat tolerance in dairy cattle |
| Journal: | Journal of dairy science, 2017, 100(6): 4683-4697 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | principal component for level of milk fat percentage |
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