| QTL Map Information |
|---|
| Chromosome: | 6 |
| QTL Peak Location: | 38.5 (cM) |
| QTL Span: | 13.26-13.46 (cM)
11.6-11.8 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
P_values | <0.001 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | SPP1 (secreted phosphoprotein 1) |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Holstein cows. |
| Breeds associated:
|
| Design: | Animals were genotyped for four SNPs in SPP1 and analyzed for somatic cell score. |
| Analysis: | Logistic regression was used. |
| Software: | SAS |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Alain K, Karrow NA, Thibault C, St-Pierre J, Lessard M, Bissonnette N |
| Affiliation: | Dairy and Swine Research and Development Centre, Agriculture and Agri-Food Canada, Sherbrooke, Quebec, J1M 1Z3, Canada. karin.alain@usherbrooke.ca |
| Title: | Osteopontin: an early innate immune marker of Escherichia coli mastitis harbors genetic polymorphisms with possible links with resistance to mastitis |
| Journal: | BMC Genomics, 2009, 10:444 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | SPP1c.1301G>A; second lactation; EBV |
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