| QTL Map Information |
|---|
| Chromosome: | 7 |
| QTL Peak Location: | 117 (cM) |
| QTL Span: | 71.22-71.42 (cM)
58.2-58.3 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | 0.24 |
| Additive effect: | 0.16 |
| Associated Gene: | CAST (calpastatin) |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Nellore cattle. |
| Breeds associated:
|
| Design: | Animals were genotyped for SNPs in CAST and CAPN1 and analyzed for longissimus dorsi tenderness. |
| Analysis: | A likelihood ratio test was conducted using a reduced model. |
| Software: | QXPAK |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Pinto LF, Ferraz JB, Meirelles FV, Eler JP, Rezende FM, Carvalho ME, Almeida HB, Silva RC |
| Affiliation: | Grupo de Melhoramento Animal e Biotecnologia, Departamento de Ciências Básicas, Faculdade de Zootecnia e Engenharia de Alimentos, Universidade de São Paulo, Pirassununga, SP, Brasil |
| Title: | Association of SNPs on CAPN1 and CAST genes with tenderness in Nellore cattle |
| Journal: | Genet Mol Res, 2010, 9(3): 1431-42 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | WSUCAST; aged 7 days post-mortem |
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