Release 56
(Apr 24, 2025)

QTL 130218 Description:

 Trait Information
Trait name: Somatic cell score Vertebrate Trait Ontology: Milk somatic cell quantity
Reported name: (n/a) Product Trait Ontology: Milk somatic cell count
Symbol: SCS Clinical Measurement Ontology: Milk somatic cell score
 QTL Map Information
Chromosome:11
QTL Peak Location:7.6 (cM)
QTL Span:n/a
5.8-6.6 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:
Analysis type:Association
Model tested:Mendelian
Test base:n/a
Threshold significance level:Significant
P_values<0.01
Dominance effect:n/a
Additive effect:n/a
Associated Gene:MAP4K4 (mitogen-activated protein kinase kinase kinase kinase 4)
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Chinese Holstein cattle.
     Breeds associated:
    Design:Animals were genotyped for nine SNPs in the MAP4K4 gene and analyzed for milk traits and somatic cell score.
    Analysis:The general linear model procedure was used.
    Software:R software
    Notes: 
    Links:Edit

     Reference
    Authors:Bhattarai D, Chen X, Ur Rehman Z, Hao X, Ullah F, Dad R, Talpur HS, Kadariya I, Cui L, Fan M, Zhang S
    Affiliation:Key Laboratory of Agricultural Animal Genetics, Breeding and Reproduction, Education Ministry of China, College of Animal Science and Technology, Huazhong Agricultural University, Wuhan 430070, People's Republic of China
    Title:Association of MAP4K4 gene single nucleotide polymorphism with mastitis and milk traits in Chinese Holstein cattle
    Journal:Journal of Dairy Research, 2017, 84(1): 76-79
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  

     Additional Information
    Comments:c.2061T/G
    User inputs on reference #28252361
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  • Cite this Data:

    Animal QTLdb: QTL130218 was published in 2017, and was curated into QTLdb on 2017-05-10. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:130218

     

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