Release 56
(Apr 24, 2025)

QTL 12986 Description:

 Trait Information
Trait name: Somatic cell score Vertebrate Trait Ontology: Milk somatic cell quantity
Reported name: Somatic cell score (DYD) Product Trait Ontology: Milk somatic cell count
Symbol: SCS Clinical Measurement Ontology: Milk somatic cell score
 QTL Map Information
Chromosome:20
QTL Peak Location:34 (cM)
QTL Span:15.47-15.67 (cM)
13.4-13.6 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:
Analysis type:Association
Model tested:Mendelian
Test base:n/a
Threshold significance level:Significant
P_values<0.01
Dominance effect:n/a
Additive effect:n/a
Associated Gene:GHR (growth hormone receptor)
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Holstein-Friesian dairy cattle.
     Breeds associated:
    Design:Animals were genotyped for 39 SNPs in GHR and analyzed for milk, mastitis, reproductive, and survival traits.
    Analysis:Weighted linear models were used.
    Software:ASREML
    Notes: 
    Links:Edit

     Reference
    Authors:Waters SM, McCabe MS, Howard DJ, Giblin L, Magee DA, Machugh DE, Berry DP
    Affiliation:Animal and Bioscience Research Department, Animal and Grassland Research and Innovation Centre, Teagasc, Grange, Dunsany, Co. Meath, Ireland
    Title:Associations between newly discovered polymorphisms in the Bos taurus growth hormone receptor gene and performance traits in Holstein Friesian dairy cattle
    Journal:Animal Genetics, 2011, 42(1): 39-49
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  

     Additional Information
    Comments:GHR19.1; DYD
    User inputs on reference #20528848
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  • Cite this Data:

    Animal QTLdb: QTL12986 was published in 2011, and was curated into QTLdb on 2010-10-01. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:12986

     

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