| QTL Map Information |
|---|
| Chromosome: | 5 |
| QTL Peak Location: | 30.13 (cM) |
| QTL Span: | 29.42-30.14 (cM)
26.1-26.7 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | RM103 |
| Peak: | BL23 |
| Lower, "Significant": | DIK2718 |
| Lower, "Suggestive": | n/a |
| Marker type: | Microsatellites |
| Analysis type: | QTL |
| Model tested: | n/a |
| Test base: | n/a |
| Threshold significance level: | n/a |
 |
VARIANCE | 0.25 | | P_values | 0.029 | | Dominance effect: | 0.010 |
| Additive effect: | -0.050 |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were from the M1 and the M3 lines of Beefbooster Inc. (Calgary, Canada) 176 male calves and their 12 respective sires of the M1 line and another 170 male calves and their 14 sires of the M3 line were genotyped for the myf5 and igf1 markers. |
| Breeds associated:
n/a
|
| Design: | Genotyping of the myf5 SNP marker was carried out using the PCR�RFLP method and allele discrimination with the 5′ nuclease assay (Applied Biosystems, Streetsville, Canada). |
| Analysis: | Haplotypes involving myf5 and igf1 in the chromosomal regions of 0 to 30 cM and 70 to 80 cM were constructed. The loci used for haplotype construction in the region of 0 to 30 cM were BM6026, BP1, myf5, and BL23 for both the M1 line and the M3 line. |
| Software: | |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | C. Li, J. Basarab, W. M. Snelling, B. Benkel, B. MUrdoch, C. Hansen, S. S. Moore |
| Affiliation: | University of Alberta, Edmonton, Alberta, Canada; Lacombe Research Centre, AAFRD, Lacombe, Alberta, Canada; Lethbridge Research Center, Alberta, Canada |
| Title: | Assessment of Positional Candidate Genes myf5 and igf1 for Growth on Bovine Chromosome 5 in Commercial Lines of Bos taurus |
| Journal: | J Anim Sci, 2004, 82:1-7 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | pre-weaning; M1 line with myf5 effect |
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