| QTL Map Information |
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| Chromosome: | 25 |
| QTL Peak Location: | 31.41 (cM) |
| QTL Span: | 31.41-31.41 (cM)
19.8-19.8 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs109589165 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | VWA3A (von Willebrand factor A domain containing 3A) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
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| Animals: | Animals were Guzerat (Bos indicus) cattle. |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina BovineSNP50 v2 BeadChip and analyzed for reactivity (based on movement during confinement). A total of 31,387 SNPs were used for analysis. |
| Analysis: | The GRAMMAR-Gamma method was used. |
| Software: | SAS, GenABEL in R |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Dos Santos FC, Peixoto MG, Fonseca PA, Pires MF, Ventura RV, Rosse ID, Bruneli FA, Machado MA, Carvalho MR |
| Affiliation: | Departamento de Biologia Geral, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil. |
| Title: | Identification of Candidate Genes for Reactivity in Guzerat (Bos indicus) Cattle: A Genome-Wide Association Study. |
| Journal: | PloS one, 2017, 12(1): e0169163 |
| Links: |
PubMed | Abstract | List all data
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| Additional Information |
|---|
| Comments: | reactivity |
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