Release 56
(Apr 24, 2025)

QTL 125375 Description:

 Trait Information
Trait name: Somatic cell score Vertebrate Trait Ontology: Milk somatic cell quantity
Reported name: (n/a) Product Trait Ontology: Milk somatic cell count
Symbol: SCS Clinical Measurement Ontology: Milk somatic cell score
 QTL Map Information
Chromosome:15
QTL Peak Location:0.00 (cM)
QTL Span:39.74-39.74 (cM)
28.7-28.7 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs110222319
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:Mendelian
Test base:Experiment-wise
Threshold significance level:Suggestive
P_values<0.10
Dominance effect:n/a
Additive effect:n/a
Associated Gene:IL10RA (interleukin 10 receptor, alpha)
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Canadian Holstein, Jersey, and Guernsey bulls.
     Breeds associated:
    Design:Animals were genotyped for 11 SNPs in the genes for IL10, IL10RA, TGFB1, and IL10RB and analyzed for EBV for somatic cell score. Six of the SNPs were used in the final analysis.
    Analysis:Linear regression models were used.
    Software:ASReml, HAPPROB
    Notes: 
    Links:Edit

     Reference
    Authors:Verschoor CP, Pant SD, Schenkel FS, Sharma BS, Karrow NA
    Affiliation:Department of Animal and Poultry Science, Centre for Genetic Improvement of Livestock, University of Guelph, Guelph, N1G 2W1, ON, Canada
    Title:SNPs in the bovine IL-10 receptor are associated with somatic cell score in Canadian dairy bulls
    Journal:Mammalian genome, 2009, 20(7): 447-54
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  

     Additional Information
    Comments:EBV
    User inputs on reference #19641966
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  • Cite this Data:

    Animal QTLdb: QTL125375 was published in 2009, and was curated into QTLdb on 2017-02-08. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:125375

     

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