| QTL Map Information |
|---|
| Chromosome: | 5 |
| QTL Peak Location: | 117.94 (cM) |
| QTL Span: | 117.94-117.94 (cM)
106.6-106.6 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs110884668 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | TSPAN9 (tetraspanin 9) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Canadian Holstein cattle. |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina BovineSNP50 BeadChip and analyzed for lactation persistency. A total of 44,100 SNP were used for analysis. |
| Analysis: | A univariate single-SNP regression mixed linear model was used. |
| Software: | SNP1101, FImpute, Haploview |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Do D N, Bissonnette N, Lacasse P, Miglior F, Sargolzaei M, Zhao X, Ibeagha-Awemu E M |
| Affiliation: | Agriculture and Agri-Food Canada, Sherbrooke Research and Development Centre, Sherbrooke, QC, J1M 0C8, Canada |
| Title: | Genome-wide association analysis and pathways enrichment for lactation persistency in Canadian Holstein cattle |
| Journal: | Journal of dairy science, 2017, 100(3):1955-1970 |
| Links: |
PubMed | Abstract | List all data
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