Release 56
(Apr 24, 2025)

QTL 12410 Description:

 Trait Information
Trait name: Somatic cell score Vertebrate Trait Ontology: Milk somatic cell quantity
Reported name: Somatic cell score Product Trait Ontology: Milk somatic cell count
Symbol: SCS Clinical Measurement Ontology: Milk somatic cell score
 QTL Map Information
Chromosome:29
QTL Peak Location:64.1 (cM)
QTL Span:52.91-55.40 (cM)
38.8-40.6 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:
Analysis type:Association
Model tested:Mendelian
Test base:n/a
Threshold significance level:Significant
P_values<0.003
Dominance effect:n/a
Additive effect:n/a
Associated Gene:IGF2 (insulin-like growth factor 2 (somatomedin A))
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Polish Holstein-Friesian cattle.
     Breeds associated:
    Design:Animals were genotyped for 2 SNPs in IGF2 and analyzed for milk traits.
    Analysis:Analyses were performed using Duncan's test with Bonferroni adjustment.
    Software: 
    Notes: 
    Links:Edit

     Reference
    Authors:Bagnicka, E; Siadkowska, E; Strzalkowska, N; Zelazowska, B; Flisikowski, K; Krzyzewski, J; Zwierzchowski, L
    Affiliation:Institute of Genetics and Animal Breeding Polish Academy of Sciences, Jastrzebiec, Poland; l.zwierzchowski@ighz.pl
    Title:Association of polymorphisms in exons 2 and 10 of the insulin-like growth factor 2 ( IGF2) gene with milk production traits in Polish Holstein-Friesian cattle.
    Journal:Journal of Dairy Research, 2010, 77(1): 37-42
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  

     Additional Information
    Comments:g.8656C>T
    User inputs on reference #19785908
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  • Cite this Data:

    Animal QTLdb: QTL12410 was published in 2010, and was curated into QTLdb on 2010-08-24. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:12410

     

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