Release 56
(Apr 24, 2025)

QTL 122426 Description:

 Trait Information
Trait name: Intramuscular fat Vertebrate Trait Ontology: Intramuscular adipose amount
Reported name: (n/a) Product Trait Ontology: Intramuscular fat content
Symbol: IMF Clinical Measurement Ontology: Intramuscular fat morphological measurement
 QTL Map Information
Chromosome:14
QTL Peak Location:33.57 (cM)
QTL Span:33.57-33.57 (cM)
23.3-23.3 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs109231213
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:Mendelian
Test base:n/a
Threshold significance level:Significant
P_values<0.001
Dominance effect:n/a
Additive effect:n/a
Associated Gene:PLAG1 (pleiomorphic adenoma gene 1)
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Hanwoo steers. Animal breed (IDs) involved:
     Breeds associated:
    Design:Animals were genotyped for SNPs in the PLAG1, SCD, CYP7B1, and FASN genes and analyzed for carcass traits and fatty acid composition.
    Analysis:A linear mixed regression model was used.
    Software: 
    Notes: 
    Links:Edit

     Reference
    Authors:Kim HJ, Sharma A, Lee SH, Lee DH, Lim DJ, Cho YM, Yang BS, Lee SH
    Affiliation:Division of Animal and Dairy Science, Chungnam National University, 99 Daehak-ro, Yuseong-gu, Daejeon, 34134, Korea
    Title:Genetic association of PLAG1, SCD, CYP7B1 and FASN SNPs and their effects on carcass weight, intramuscular fat and fatty acid composition in Hanwoo steers (Korean cattle)
    Journal:Animal genetics, 2017, 48(2):251-252
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #27878829
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  • Cite this Data:

    Animal QTLdb: QTL122426 was published in 2017, and was curated into QTLdb on 2016-12-15. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:122426

     

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