| QTL Map Information |
|---|
| Chromosome: | 16 |
| QTL Peak Location: | 89.18 (cM) |
| QTL Span: | 89.13-89.22 (cM)
68.7-68.8 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs42998224 |
| Peak: | |
| Lower, "Significant": | rs110873437 |
| Lower, "Suggestive": | n/a |
| Marker type: | CNV |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
P_values | 9.35E-5 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Holstein cattle. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina BovineSNP50 BeadChip and association of identified CNVs with production traits was analyzed. |
| Analysis: | Linear regression analysis under the additive genetic model was used. |
| Software: | GenomeStudio, Golden Helix SVS, Haploview |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Xu L, Cole JB, Bickhart DM, Hou Y, Song J, VanRaden PM, Sonstegard TS, Van Tassell CP, Liu GE |
| Affiliation: | Animal Genomics and Improvement Laboratory, BARC, USDA-ARS, Beltsville, Maryland 20705, USA |
| Title: | Genome wide CNV analysis reveals additional variants associated with milk production traits in Holsteins |
| Journal: | BMC genomics, 2014, 15: 683 |
| Links: |
PubMed | Abstract | List all data
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