| QTL Map Information |
|---|
| Chromosome: | 20 |
| QTL Peak Location: | 35.24 (cM) |
| QTL Span: | 35.24-35.24 (cM)
31.9-31.9 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs385640152 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
VARIANCE | 1.3% | | P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | GHR (growth hormone receptor) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were German Fleckvieh and Holstein-Friesian cattle. |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina BovineSNP50, with data imputed to HD, or BovineHD BeadChip. Targeted sequence imputation for regions containing four candidate causal variants was performed, and association with milk composition and fertility traits was analyzed. |
| Analysis: | A two-step variance components-based approach was used. |
| Software: | EMMAX |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Pausch H, Wurmser C, Reinhardt F, Emmerling R, Fries R |
| Affiliation: | Chair of Animal Breeding, Technische Universität München, 85354 Freising, Germany |
| Title: | Short communication: Validation of 4 candidate causative trait variants in 2 cattle breeds using targeted sequence imputation |
| Journal: | Journal of dairy science, 2015, 98(6): 4162-7 |
| Links: |
PubMed | Abstract | List all data
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