| QTL Map Information |
|---|
| Chromosome: | 5 |
| QTL Peak Location: | 97.91 (cM) |
| QTL Span: | 97.61-98.21 (cM)
88.4-88.7 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs133539520 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 0.00209 | | Dominance effect: | n/a |
| Additive effect: | -2.784 |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Australian Holstein and Jersey cows.
Animal breed (IDs) involved: |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina BovineSNP50 BeadChip, with data imputed to HD, and analyzed for milk yield and calving interval. A total of 408,255 SNPs were used for analysis. |
| Analysis: | A mixed linear model was used. |
| Software: | BEAGLE, ASReml, R software |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Aliloo H, Pryce JE, González-Recio O, Cocks BG, Hayes BJ |
| Affiliation: | Dairy Futures Cooperative Research Centre (CRC), AgriBio, 5 Ring Road, Bundoora, VIC, 3083, Australia |
| Title: | Validation of markers with non-additive effects on milk yield and fertility in Holstein and Jersey cows |
| Journal: | BMC genetics, 2015, 16: 89 |
| Links: |
PubMed | Abstract | List all data
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