| QTL Map Information |
|---|
| Chromosome: | 18 |
| QTL Peak Location: | 23.2 (cM) |
| QTL Span: | 27.48-27.68 (cM)
21.4-21.6 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 0.040 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | NOD2 (nucleotide-binding oligomerization domain containing 2) |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #11891
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were Spanish and Dutch Holstein-Friesian cattle. |
| Breeds associated:
|
| Design: | Animals were genotyped for 18 SNPs in NOD2 and analyzed for infection with Mycobacterium avium subsp. paratuberculosis |
| Analysis: | A chi-squared test was used. |
| Software: | Haploview, SPSS |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Ruiz-Larranaga O, Garrido JM, Iriondo M, Manzano C, Molina E, Koets AP, Rutten VP, Juste RA, Estonba A |
| Affiliation: | Department of Genetics, Physical Anthropology and Animal Physiology, University of the Basque Country, Sarriena s/n, 48940 Leioa (Bizkaia), Spain |
| Title: | Genetic association between bovine NOD2 polymorphisms and infection by Mycobacterium avium subsp. paratuberculosis in Holstein-Friesian cattle |
| Journal: | Animal genetics, 2010, 41(6): 652-5 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | c.*1908 allele C; Dutch population |
User inputs on reference #20477790
Add your comments
Note similar findings
Note contradictions
|
