Release 56
(Apr 24, 2025)

QTL 11486 Description:

 Trait Information
Trait name: Intramuscular fat Vertebrate Trait Ontology: Intramuscular adipose amount
Reported name: Intramuscular fat Product Trait Ontology: Intramuscular fat content
Symbol: IMF Clinical Measurement Ontology: Intramuscular fat morphological measurement
 QTL Map Information
Chromosome:14
QTL Peak Location:44.2 (cM)
QTL Span:21.03-21.23 (cM)
16.7-16.8 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:
Analysis type:Association
Model tested:Mendelian
Test base:n/a
Threshold significance level:Significant
P_values0.0495
Dominance effect:n/a
Additive effect:n/a
Associated Gene:FABP4 (fatty acid binding protein 4, adipocyte)
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were from a sample of Angus, Hereford, Murray Grey, Shorthorn, Brahman, Belmont Red, and Santa Gertrudis cattle.
     Breeds associated:
    Design:Animals were genotyped for SNPs in FABP4 and analyzed for intramuscular fat deposition.
    Analysis:A full animal model was fitted in ASReml.
    Software:ASReml
    Notes: 
    Links:Edit

     Reference
    Authors:Barendse W, Bunch RJ, Thomas MB, Harrison BE
    Affiliation:Cooperative Research Centre for Beef Genetic Technologies, CSIRO Livestock Industries, Queensland Bioscience Precinct, St Lucia 4067, Australia; bill.barendse@csiro.au
    Title:A splice site single nucleotide polymorphism of the fatty acid binding protein 4 gene appears to be associated with intramuscular fat deposition in longissimus muscle in Australian cattle
    Journal:Animal genetics, 2009, 40(5): 770-3
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  

     Additional Information
    Comments:g.2502C>G
    User inputs on reference #19466936
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  • Cite this Data:

    Animal QTLdb: QTL11486 was published in 2009, and was curated into QTLdb on 2010-04-08. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:11486

     

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