| QTL Map Information |
|---|
| Chromosome: | 17 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
|
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs133057998 |
| Peak: | |
| Lower, "Significant": | rs133456567 |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | QTL |
| Model tested: | Mendelian |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
P_values | 0.0027 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Nellore cattle. |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina BovineHD BeadChip. CNVs were identified and analyzed for association with growth and production traits. |
| Analysis: | Linear regression in the additive genetic model was used to identify significant CNVs. |
| Software: | GenomeStudio, Golden Helix |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Zhou Y, Utsunomiya YT, Xu L, Hay el HA, Bickhart DM, Alexandre PA, Rosen BD, Schroeder SG, Carvalheiro R, de Rezende Neves HH, Sonstegard TS, Van Tassell CP, Ferraz JB, Fukumasu H, Garcia JF, Liu GE |
| Affiliation: | Animal Genomics and Improvement Laboratory, BARC, USDA-ARS, Room 111, BARC-East, Beltsville, Maryland, 20705, USA |
| Title: | Genome-wide CNV analysis reveals variants associated with growth traits in Bos indicus |
| Journal: | BMC genomics, 2016, 17(1): 419 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | precocity at yearling (ratio between depth of thoracic cavity and limb height) |
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