| QTL Map Information |
|---|
| Chromosome: | 1 |
| QTL Peak Location: | 70.48 (cM) |
| QTL Span: | 70.46-70.51 (cM)
72.7-72.8 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs132761205 |
| Peak: | |
| Lower, "Significant": | rs109908529 |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | QTL |
| Model tested: | Mendelian |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
VARIANCE | 2.00 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Nellore cattle. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina BovineHD BeadChip and analyzed for flight speed. A total of 455,374 SNPs were used for analysis. |
| Analysis: | GWAS was performed using a single-step GBLUP procedure using Bayesian inference via Gibbs sampling. |
| Software: | GIBBS2F90, R software |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Valente TS, Baldi F, Sant'Anna AC, Albuquerque LG, Paranhos da Costa MJ |
| Affiliation: | Universidade Estadual Paulista (Unesp), Faculdade de Ciencias Agrarias e Veterinarias, Departamento de Zootecnia, Via de Acesso Professor Paulo Donato Castellane, Jaboticabal, SP 14.884-900, Brazil |
| Title: | Genome-Wide Association Study between Single Nucleotide Polymorphisms and Flight Speed in Nellore Cattle |
| Journal: | PloS one, 2016, 11(6): e0156956 |
| Links: |
PubMed | Abstract | List all data
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