| QTL Map Information |
|---|
| Chromosome: | 13 |
| QTL Peak Location: | 38.77 (cM) |
| QTL Span: | 38.77-38.77 (cM)
32.2-32.2 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs133028352 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
P_values | 0.0373 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | TMEM236 (transmembrane protein 236) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Simmental cattle. |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina BovineHD BeadChip and the Illumina Infinium II Assay and analyzed for growth and meat quality traits. A total of 677,855 SNPs were used for analysis. |
| Analysis: | A compressed mixed linear model was used. |
| Software: | GAPIT in R, PLINK, Haploview |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Xia J, Qi X, Wu Y, Zhu B, Xu L, Zhang L, Gao X, Chen Y, Li J, Gao H |
| Affiliation: | Institute of Animal Science, Chinese Academy of Agricultural Science, No.2 Yuanmingyuan West Road, Haidian District, Beijing, 100193, China |
| Title: | Genome-wide association study identifies loci and candidate genes for meat quality traits in Simmental beef cattle |
| Journal: | Mammalian genome, 2016, 27(5-6): 246-55 |
| Links: |
PubMed | Abstract | List all data
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