| QTL Map Information |
|---|
| Chromosome: | 18 |
| QTL Peak Location: | 83.05 (cM) |
| QTL Span: | 83.05-83.05 (cM)
63.4-63.4 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs42978574 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
P_values | 4.47E-11 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Holstein-Friesian cattle.
Animal breed (IDs) involved: 106
Animal breed (IDs) involved: |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina BovineHD BeadChip (or had lower-density genotypes imputed to HD) and analyzed for calving interval. Genes differentially expressed between high- and low-fertility groups were analyzed for concordance with significant SNPs from GWAS. |
| Analysis: | Univariate animal linear mixed models were used for GWAS. |
| Software: | Beagle, WOMBAT, R software |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Moore SG, Pryce JE, Hayes BJ, Chamberlain AJ, Kemper KE, Berry DP, McCabe M, Cormican P, Lonergan P, Fair T, Butler ST |
| Affiliation: | Animal and Grassland Research and Innovation Centre, Teagasc, Moorepark, Fermoy, County Cork, Ireland |
| Title: | Differentially Expressed Genes in Endometrium and Corpus Luteum of Holstein Cows Selected for High and Low Fertility Are Enriched for Sequence Variants Associated with Fertility |
| Journal: | Biology of reproduction, 2016, 94(1): 19 |
| Links: |
PubMed | Abstract | List all data
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