Release 56
(Apr 24, 2025)

QTL 101359 Description:

 Trait Information
Trait name: Percentage abnormal sperm Vertebrate Trait Ontology: n/a
Reported name: Deformity rate Product Trait Ontology: n/a
Symbol: ABSP Clinical Measurement Ontology: Abnormal sperm count to total sperm count ratio
 QTL Map Information
Chromosome:2
QTL Peak Location:96.39 (cM)
QTL Span:96.39-96.39 (cM)
104.9-104.9 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":rs110469441
Peak:
Lower, "Significant":rs381177196
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:QTL
Model tested:Mendelian
Test base:n/a
Threshold significance level:Significant
P_values<0.05
Dominance effect:n/a
Additive effect:n/a
Associated Gene:TNP1 (transition protein 1)
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Chinese Holstein bulls.
     Breeds associated:
    Design:Animals were genotyped for two SNPs in TNP1 and analyzed for semen quality traits.
    Analysis:A general least-squares model was used.
    Software:SHEsis, SAS
    Notes: 
    Links:Edit

     Reference
    Authors:Zhang S, Zhang Y, Yang C, Zhang W, Ju Z, Wang X, Jiang Q, Sun Y, Huang J, Zhong J, Wang C
    Affiliation:Dairy Cattle Research Center, Shandong Academy of Agricultural Science, Jinan, P.R. China
    Title:TNP1 Functional SNPs in bta-miR-532 and bta-miR-204 Target Sites Are Associated with Semen Quality Traits in Chinese Holstein Bulls
    Journal:Biology of reproduction, 2015, 92(6): 139
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #25904013
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  • Cite this Data:

    Animal QTLdb: QTL101359 was published in 2015, and was curated into QTLdb on 2016-06-29. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:101359

     

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