Release 56
(Apr 24, 2025)

QTL 101297 Description:

 Trait Information
Trait name: Age at puberty Vertebrate Trait Ontology: Onset of fertility
Reported name: early puberty Product Trait Ontology: n/a
Symbol: PUBAGE Clinical Measurement Ontology: Age of puberty
 QTL Map Information
Chromosome:10
QTL Peak Location:37.58 (cM)
QTL Span:37.58-37.58 (cM)
33.7-33.7 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs109551605
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:Mendelian
Test base:Comparison-wise
Threshold significance level:Significant
P_values<1E-4
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Nellore heifers.
     Breeds associated:
    Design:Animals were genotyped using the Illumina BovineHD BeadChip and analyzed for pregnancy status. A total of 473,792 SNPs were used for analysis.
    Analysis:The mmscore function was used as a score to test for association between traits and genetic polymorphisms.
    Software:GenABEL in R
    Notes: 
    Links:Edit

     Reference
    Authors:Nascimento A V, Matos M C, Seno L O, Romero A R S, Garcia J F, Grisolia A B
    Affiliation:Faculdade de Ciências Biológicas e Ambientais, Universidade Federal da Grande Dourados, Dourados, MS, Brasil
    Title:Genome wide association study on early puberty in Bos indicus
    Journal:Genetics and molecular research : GMR, 2016, 15(1)
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #26909970
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  • Cite this Data:

    Animal QTLdb: QTL101297 was published in 2016, and was curated into QTLdb on 2016-06-27. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:101297

     

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