Release 56
(Apr 24, 2025)

This linkage-map based data has been obsolete
(see Release notes 51, 52, 53). Information
provided here is only for retrospective online
support of publications that used this data.

QTL 10107 Description:

 Trait Information
Trait name: Somatic cell score Vertebrate Trait Ontology: Milk somatic cell quantity
Reported name: Somatic cell score Product Trait Ontology: Milk somatic cell count
Symbol: SCS Clinical Measurement Ontology: Milk somatic cell score
 QTL Map Information
Chromosome:5
QTL Peak Location:70 (cM)
QTL Span:34.02-34.22 (cM)
30.1-30.3 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:
Analysis type:QTL
Model tested:Mendelian
Test base:n/a
Threshold significance level:Significant
P_values<0.001
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #10107
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  •  QTL Experiment in Brief
    Animals:Animals were Danish Holstein.
     Breeds associated:
    Design:QTL for clinical mastitis and somatic cell score were investigated for specificity to particular pathogens.
    Analysis:An independence test and a generalized linear mixed model were used.
    Software:SAS
    Notes: 
    Links:Edit

     Reference
    Authors:Sorensen, L P; Guldbrandtsen, B; Thomasen, J R; Lund, M S
    Affiliation:University of Copenhagen, Faculty of Life Sciences, Department of Large Animal Sciences, DK-1870 Frederiksberg C, Denmark; larspeter.sorensen@agrsci.dk
    Title:Pathogen-specific effects of quantitative trait loci affecting clinical mastitis and somatic cell count in Danish Holstein cattle.
    Journal:Journal of dairy science, 2008, 91 (6): 2493-500
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  

     Additional Information
    Comments:specific for E. coli
    User inputs on reference #18487673
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  • Cite this Data:

    Animal QTLdb: QTL10107 was published in 2008, and was curated into QTLdb on 2009-12-18. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:10107

     

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