Release 56
(Apr 24, 2025)

Reference # 37108271 Details:

Authors:Prakapenka D, Liang Z, Da Y (Contact: yda@umn.edu)
Affiliation:Department of Animal Science, University of Minnesota, Saint Paul, MN 55108, USA
Title:Genome-Wide Association Study of Age at First Calving in U.S. Holstein Cows
Journal:International Journal of Molecular Sciences, 2023, 24(8):7109 DOI: 10.3390/ijms24087109
Abstract:

A genome-wide association study (GWAS) of age at first calving (AFC) using 813,114 first lactation Holstein cows and 75,524 SNPs identified 2063 additive effects and 29 dominance effects with p-values < 10-8. Three chromosomes had highly significant additive effects in the regions of 7.86-8.12 Mb of Chr15, 27.07-27.48 Mb and 31.25-32.11 Mb of Chr19, and 26.92-32.60 Mb of Chr23. Two of the genes in those regions were reproductive hormone genes with known biological functions that should be relevant to AFC, the sex hormone binding globulin (SHBG) gene, and the progesterone receptor (PGR) gene. The most significant dominance effects were near or in EIF4B and AAAS of Chr05 and AFF1 and KLHL8 of Chr06. All dominance effects were positive overdominance effects where the heterozygous genotype had an advantage, and the homozygous recessive genotype of each SNP had a very negative dominance value. Results from this study provided new evidence and understanding about the genetic variants and genome regions affecting AFC in U.S. Holstein cows.

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