Cattle QTL Database

Release 56
(Apr 24, 2025)

Curators: Cari Park /
Curated: 2025-05-15
Updated:

Publication # 39695361 Details

Authors:	Rodrigues GRD, Brito LF, Mota LFM, Cyrillo JNSG, Valente JPS, Benfica LF, Silva Neto JB, Borges MS, Monteiro FM, Faro LE, Albuquerque LG, Mercadante MEZ (Contact: grd.rodrigues@unesp.br)
Affiliation:	São Paulo State University, School of Agriculture and Veterinary Science, Jaboticabal, SP, 14884-900, Brazil
Title:	Genome-wide association studies and functional annotation of pre-weaning calf mortality and reproductive traits in Nellore cattle from experimental selection lines
Journal:	BMC Genomics, 25(1): 1196 (2024)	DOI: 10.1186/s12864-024-11113-4
Links:	PubMed \| Abstract \|	( Related study: none )
Click on each trait to browse further along the related trait ontology tree Click on each chromosome number to find the detailed QTL information on that chromosome Number of QTL/association reported by traits: QTL for Conception rate reported for chromosome(s): Chr.1: QTL:316869. Chr.4: QTL:316865. Chr.5: QTL:316863. Chr.7: QTL:316860, QTL:316868. Chr.14: QTL:316866. Chr.19: QTL:316864. Chr.25: QTL:316862. Chr.26: QTL:316867. Chr.27: QTL:316861. QTL for Pregnancy loss reported for chromosome(s): Chr.1: QTL:316875. Chr.5: QTL:316874, QTL:316879. Chr.8: QTL:316872. Chr.11: QTL:316873, QTL:316878. Chr.15: QTL:316871, QTL:316877. Chr.20: QTL:316870. Chr.23: QTL:316876. QTL for Stillbirth reported for chromosome(s): Chr.1: QTL:316880, QTL:316882, QTL:316889. Chr.9: QTL:316881. Chr.11: QTL:316886. Chr.12: QTL:316887. Chr.17: QTL:316885. Chr.18: QTL:316888. Chr.19: QTL:316884. Chr.27: QTL:316883. QTL for Calf mortality reported for chromosome(s): Chr.1: QTL:316897. Chr.3: QTL:316895. Chr.8: QTL:316892. Chr.9: QTL:316896. Chr.12: QTL:316891, QTL:316893. Chr.19: QTL:316898, QTL:316899. Chr.25: QTL:316890. Chr.27: QTL:316894. QTL/association Reported by chromosomes: Chr.1 (6), Chr.3 (1), Chr.4 (1), Chr.5 (3), Chr.7 (2), Chr.8 (2), Chr.9 (2), Chr.11 (3), Chr.12 (3), Chr.14 (1), Chr.15 (2), Chr.17 (1), Chr.18 (1), Chr.19 (4), Chr.20 (1), Chr.23 (1), Chr.25 (2), Chr.26 (1), Chr.27 (3). Number of gene-based eQTL/associations: None

Cite this Dataset:

Animal QTLdb: Dataset from Rodrigues GRD, Brito LF, Mota LFM, Cyrillo JNSG, Valente JPS, Benfica LF, Silva Neto JB, Borges MS, Monteiro FM, Faro LE, Albuquerque LG, Mercadante MEZ (2024). Genome-wide association studies and functional annotation of pre-weaning calf mortality and reproductive traits in Nellore cattle from experimental selection lines. BMC genomics, 25(1): 1196; Curated into QTLdb on 2025-05-15. Universal link to this data set: https://www.animalgenome.org/QTLdb/supp/?t=TsMn7Q2RuE

Rodrigues GRD, Brito LF, Mota LFM, Cyrillo JNSG, Valente JPS, Benfica LF, Silva Neto JB, Borges MS, Monteiro FM, Faro LE, Albuquerque LG, Mercadante MEZ (2024). Genome-wide association studies and functional annotation of pre-weaning calf mortality and reproductive traits in Nellore cattle from experimental selection lines. BMC genomics, 25(1): 1196; DOI: https://dx.doi.org/10.1186/s12864-024-11113-4

Publication # 39695361 Details

Number of QTL/association reported by traits:

QTL/association Reported by chromosomes:

Number of gene-based eQTL/associations: